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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
candidate regulatory elements
123
target gene predictions
110
accessible chromatin
96
chromatin state
67
gene expression
35
binding sites
29
histone modifications
26
variant allelic effects
eQTL
15
Fine-mapped variants
14
differential activity
4
caQTL
2
pQTL
Date released
219
September, 2022
150
February, 2021
57
November, 2021
24
March, 2020
23
June, 2020
22
February, 2024
22
January, 2020
21
May, 2020
19
May, 2021
17
September, 2023
13
February, 2020
12
October, 2022
11
August, 2021
7
August, 2017
7
March, 2023
7
November, 2022
6
April, 2019
4
February, 2023
4
October, 2019
3
April, 2020
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
483
bed bed3+
86
tsv
84
bed bed9
75
bigWig
12
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
665
Homo sapiens
Biosample type
291
primary cell
288
tissue
50
in vitro differentiated cells
35
cell line
1
stem cell
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
586
AMP
57
ENCODE
15
KPMP
3
LungMap
2
ITG
2
T1D
Genome assembly (visualization)
582
hg19
195
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
665 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 49 more…
tissue
heart
37
20
5
21
3
1
1
2
heart left ventricle
11
7
3
8
1
1
2
adipose tissue
7
8
2
6
3
1
1
coronary artery
3
3
3
3
1
2
3
1
heart right ventricle
6
5
1
5
1
1
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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