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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
277
gene expression
241
accessible chromatin
189
candidate regulatory elements
181
target gene predictions
119
chromatin state
93
differential activity
55
variant allelic effects
50
binding sites
histone modifications
15
Fine-mapped variants
13
eQTL
5
caQTL
Date released
288
September, 2022
225
February, 2021
155
September, 2023
132
November, 2021
82
February, 2024
38
March, 2023
38
May, 2021
32
June, 2020
31
January, 2020
31
May, 2020
29
August, 2021
29
March, 2020
21
February, 2020
20
January, 2021
16
February, 2023
15
November, 2022
9
October, 2019
7
April, 2020
7
October, 2022
6
April, 2019
6
August, 2018
6
November, 2019
5
January, 2022
3
August, 2017
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
725
bed bed3+
366
tsv
199
bigWig
111
bed bed9
78
txt
17
bigBed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1238
Homo sapiens
Biosample type
838
primary cell
332
tissue
43
cell line
25
in vitro differentiated cells
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
922
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
856
hg19
348
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
1238 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
1
3
1
2
1
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 155 more…
tissue
heart
3
5
37
20
21
2
1
heart left ventricle
1
3
11
7
8
2
1
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
heart right ventricle
1
1
6
5
5
1
+ See 34 more…
cell line
EndoC_BH1
8
8
1
3
1
colon epithelial cell
1
1
1
fibroblast of cardiac tissue
2
1
keratinocyte
3
smooth muscle cell of the coronary artery
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 5 more…
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