Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
63
chromatin state
63
target gene predictions
31
accessible chromatin
21
gene expression
14
binding sites
histone modifications
10
variant allelic effects
9
Fine-mapped variants
6
eQTL
2
caQTL
Date released
141
September, 2022
68
February, 2021
15
March, 2020
12
January, 2020
12
May, 2020
11
February, 2020
11
November, 2021
8
August, 2021
8
June, 2020
6
April, 2019
5
February, 2024
5
May, 2021
3
February, 2023
3
January, 2022
3
November, 2019
2
January, 2021
2
October, 2019
2
October, 2022
1
May, 2019
1
May, 2022
Available data
225
bed bed3+
57
bed bed9
29
tsv
24
bigWig
10
bigBed bed9
1
bed bed9+
Organism
319
Homo sapiens
Biosample type
213
tissue
80
primary cell
21
cell line
5
in vitro differentiated cells
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
306
AMP
11
ENCODE
2
T1D
Genome assembly (visualization)
293
hg19
105
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
319 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
gene expression
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
21
20
5
3
1
2
heart left ventricle
11
8
7
3
1
2
1
coronary artery
3
3
3
3
1
2
3
2
1
heart right ventricle
6
5
5
1
1
1
right atrium auricular region
3
2
2
3
2
2
3
2
+ See 10 more…
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
1
2
1
4
fibroblast of cardiac tissue
3
3
4
2
foreskin melanocyte
4
1
1
megakaryocyte
2
2
+ See 12 more…
cell line
EH
2
1
1
EL
2
1
1
ELR
2
1
1
fibroblast of cardiac tissue
2
1
foreskin fibroblast
1
1
1
+ See 1 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
foreskin melanocyte
1
1
cardiac fibroblast
1
See all biosamples
Download