Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
candidate regulatory elements
123
target gene predictions
110
accessible chromatin
35
binding sites
29
histone modifications
25
variant allelic effects
12
chromatin state
4
caQTL
3
eQTL
1
pQTL
Date released
146
September, 2022
126
February, 2021
57
November, 2021
23
June, 2020
19
February, 2024
19
May, 2020
18
January, 2020
16
May, 2021
12
October, 2022
9
March, 2020
7
August, 2017
7
November, 2022
4
February, 2023
3
April, 2020
3
May, 2022
3
November, 2019
2
August, 2021
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
486
bed bed3+
91
tsv
84
bed bed9
75
bigWig
12
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
486
Homo sapiens
Biosample type
220
primary cell
190
tissue
44
in vitro differentiated cells
31
cell line
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
423
AMP
57
ENCODE
3
LungMap
2
T1D
1
ITG
Genome assembly (visualization)
483
hg19
96
GRCh38
BIOSAMPLE
TYPE
486 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
chromatin state
caQTL
eQTL
pQTL
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
foreskin fibroblast
6
2
1
4
2
osteoblast
2
2
5
3
2
fibroblast of lung
6
4
2
1
+ See 38 more…
tissue
heart
37
20
5
1
1
2
heart left ventricle
11
7
3
1
2
adipose tissue
7
8
2
1
1
1
heart right ventricle
6
5
1
1
coronary artery
3
3
3
2
1
+ See 13 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
4
mesenchymal stem cell
3
3
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
smooth muscle cell of the coronary artery
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download