Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
138
candidate regulatory elements
119
target gene predictions
90
chromatin state
58
binding sites
53
accessible chromatin
36
histone modifications
26
gene expression
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
219
September, 2022
154
February, 2021
33
February, 2024
22
June, 2020
20
October, 2022
15
March, 2020
12
January, 2020
May, 2020
11
February, 2020
11
November, 2021
10
August, 2021
8
May, 2021
6
April, 2019
3
February, 2023
3
January, 2022
3
November, 2019
2
August, 2017
2
January, 2021
2
October, 2019
1
March, 2024
1
May, 2019
1
May, 2022
Available data
413
bed bed3+
82
bed bed9
34
tsv
32
bigWig
9
bigBed bed9
1
bed bed9+
Organism
539
Homo sapiens
Biosample type
257
cell line
228
tissue
53
primary cell
1
in vitro differentiated cells
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
526
AMP
11
ENCODE
2
T1D
Genome assembly (visualization)
508
hg19
166
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
539 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
Fine-mapped variants
eQTL
caQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 36 more…
tissue
heart
37
20
20
1
5
1
3
heart left ventricle
11
7
8
3
1
1
1
coronary artery
3
3
3
3
1
3
2
1
heart right ventricle
6
5
5
1
1
right atrium auricular region
3
2
2
3
2
3
2
+ See 23 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
peripheral blood mononuclear cell
4
1
1
stromal cell of bone marrow
2
1
1
cardiac fibroblast
3
endocardial cell
1
2
+ See 13 more…
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
Download