Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
95
candidate regulatory elements
66
chromatin state
65
target gene predictions
38
accessible chromatin
25
gene expression
13
binding sites
12
histone modifications
10
variant allelic effects
9
Fine-mapped variants
6
eQTL
2
caQTL
Date released
150
September, 2022
84
February, 2021
15
March, 2020
12
January, 2020
12
May, 2020
11
February, 2020
11
November, 2021
10
June, 2020
8
August, 2021
6
April, 2019
5
February, 2024
4
May, 2021
3
February, 2023
3
January, 2022
November, 2019
2
January, 2021
2
October, 2019
1
May, 2019
1
May, 2022
1
October, 2022
Available data
240
bed bed3+
60
bed bed9
33
tsv
29
bigWig
10
bigBed bed9
1
bed bed9+
Organism
341
Homo sapiens
Biosample type
233
tissue
62
cell line
45
primary cell
1
in vitro differentiated cells
Organ
948
epithelium
652
kidney
465
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
328
AMP
11
ENCODE
2
T1D
Genome assembly (visualization)
311
hg19
113
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
341 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
21
20
4
3
1
1
2
heart left ventricle
11
8
7
3
1
1
2
1
coronary artery
3
3
3
2
1
2
3
2
1
heart right ventricle
6
5
5
1
1
1
right atrium auricular region
3
2
2
2
2
2
3
2
+ See 21 more…
cell line
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
L1-S8
2
1
1
1
OCI-LY3
2
1
1
1
+ See 8 more…
primary cell
fibroblast of cardiac tissue
3
3
4
2
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
cardiac fibroblast
3
endocardial cell
1
2
+ See 11 more…
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
Download