Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
147
candidate regulatory elements
96
target gene predictions
88
chromatin state
41
accessible chromatin
25
binding sites
23
gene expression
21
histone modifications
11
variant allelic effects
9
Fine-mapped variants
9
eQTL
2
caQTL
Date released
213
September, 2022
121
February, 2021
21
November, 2021
15
March, 2020
13
June, 2020
12
January, 2020
12
May, 2020
11
February, 2020
9
May, 2021
8
August, 2021
6
April, 2019
6
February, 2024
6
January, 2022
4
October, 2022
3
February, 2023
3
November, 2019
2
January, 2021
2
March, 2024
2
October, 2019
1
August, 2017
1
May, 2019
1
May, 2022
Available data
349
bed bed3+
81
bed bed9
31
tsv
29
bigWig
10
bigBed bed9
1
bed bed9+
Organism
472
Homo sapiens
Biosample type
239
tissue
144
primary cell
79
cell line
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
449
AMP
21
ENCODE
2
T1D
Genome assembly (visualization)
441
hg19
142
GRCh38
organ_slims!
pituitary gland
BIOSAMPLE
TYPE
472 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
20
21
5
1
3
1
2
heart left ventricle
11
7
8
3
1
1
2
1
coronary artery
3
3
3
3
1
2
3
2
1
heart right ventricle
6
5
5
1
1
1
right atrium auricular region
3
2
2
3
2
2
3
2
+ See 16 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
1
4
2
fibroblast of cardiac tissue
3
4
3
2
fibroblast of dermis
4
4
3
1
+ See 23 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 17 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
cardiac fibroblast
1
skin fibroblast
1
See all biosamples
Download