Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
78
target gene predictions
66
chromatin state
33
accessible chromatin
22
gene expression
17
binding sites
12
histone modifications
11
variant allelic effects
9
Fine-mapped variants
7
eQTL
2
caQTL
Date released
150
September, 2022
77
February, 2021
16
May, 2021
16
November, 2021
15
March, 2020
12
January, 2020
11
February, 2020
11
May, 2020
9
June, 2020
8
August, 2021
6
April, 2019
6
February, 2024
4
January, 2022
3
February, 2023
3
November, 2019
3
October, 2022
2
May, 2024
2
October, 2019
1
August, 2017
1
March, 2024
1
May, 2019
Available data
259
bed bed3+
60
bed bed9
30
tsv
25
bigWig
10
bigBed bed9
Organism
357
Homo sapiens
Biosample type
219
tissue
79
primary cell
55
cell line
4
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
341
AMP
16
ENCODE
Genome assembly (visualization)
329
hg19
116
GRCh38
organ_slims!
ureter
eye
BIOSAMPLE
TYPE
357 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
20
21
5
3
1
1
2
heart left ventricle
11
7
8
3
1
1
2
1
coronary artery
3
3
3
3
1
2
3
2
1
heart right ventricle
6
5
5
1
1
1
right atrium auricular region
3
2
2
3
2
2
3
2
+ See 12 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
fibroblast of cardiac tissue
3
4
3
2
mammary epithelial cell
3
1
1
1
4
fibroblast of mammary gland
2
1
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
+ See 10 more…
cell line
MCF-7
9
6
5
1
3
2
pituitary stalk
10
T47D
3
2
2
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
+ See 1 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
cardiac fibroblast
1
See all biosamples
Download