Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
142
candidate regulatory elements
122
target gene predictions
93
chromatin state
59
binding sites
53
accessible chromatin
37
histone modifications
26
gene expression
10
variant allelic effects
9
Fine-mapped variants
8
eQTL
2
caQTL
1
pQTL
Date released
225
September, 2022
158
February, 2021
33
February, 2024
22
June, 2020
20
October, 2022
15
March, 2020
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2020
11
November, 2021
8
May, 2021
6
April, 2019
3
February, 2023
3
January, 2022
3
November, 2019
2
August, 2017
2
January, 2021
2
October, 2019
1
March, 2024
1
May, 2019
1
May, 2022
Available data
433
bed bed3+
85
bed bed9
34
tsv
32
bigWig
10
bigBed bed9
1
bed bed9+
Organism
562
Homo sapiens
Biosample type
267
cell line
240
tissue
54
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
549
AMP
11
ENCODE
2
T1D
Genome assembly (visualization)
531
hg19
169
GRCh38
BIOSAMPLE
TYPE
562 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
Fine-mapped variants
eQTL
caQTL
pQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 39 more…
tissue
heart
37
20
21
1
5
1
3
2
heart left ventricle
11
7
8
3
1
1
2
1
coronary artery
3
3
3
3
1
2
3
2
1
heart right ventricle
6
5
5
1
1
1
right atrium auricular region
3
2
2
3
2
2
3
2
+ See 24 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
peripheral blood mononuclear cell
4
1
1
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
cardiac fibroblast
3
+ See 13 more…
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
Download