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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
142
candidate regulatory elements
122
target gene predictions
92
chromatin state
59
binding sites
44
accessible chromatin
37
histone modifications
24
gene expression
10
variant allelic effects
9
Fine-mapped variants
8
eQTL
2
caQTL
1
pQTL
Date released
225
September, 2022
158
February, 2021
33
February, 2024
22
June, 2020
20
October, 2022
15
March, 2020
January, 2020
12
May, 2020
11
August, 2021
11
February, 2020
11
November, 2021
8
May, 2021
6
April, 2019
3
February, 2023
3
January, 2022
3
November, 2019
2
August, 2017
2
January, 2021
2
October, 2019
1
March, 2024
1
May, 2019
1
May, 2022
Available data
424
bed bed3+
84
bed bed9
32
tsv
23
bigWig
9
bigBed bed9
1
bed bed9+
Organism
550
Homo sapiens
Biosample type
267
cell line
228
tissue
54
primary cell
1
in vitro differentiated cells
Organ
935
epithelium
638
kidney
450
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
537
AMP
11
ENCODE
2
T1D
Genome assembly (visualization)
521
hg19
159
GRCh38
month_released!
January, 2020
BIOSAMPLE
TYPE
550 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
Fine-mapped variants
eQTL
caQTL
pQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 39 more…
tissue
heart
37
20
21
1
3
1
3
2
heart left ventricle
11
7
8
1
1
1
2
1
coronary artery
3
3
3
2
2
3
2
1
heart right ventricle
6
5
5
1
1
right atrium auricular region
3
2
2
2
1
2
3
2
+ See 23 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
peripheral blood mononuclear cell
4
1
1
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
cardiac fibroblast
3
+ See 13 more…
in vitro differentiated cells
cardiac fibroblast
1
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