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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
gene expression
220
accessible chromatin
169
candidate regulatory elements
167
target gene predictions
103
chromatin state
89
differential activity
49
variant allelic effects
37
binding sites
25
histone modifications
9
Fine-mapped variants
9
eQTL
4
caQTL
Date released
256
September, 2022
222
February, 2021
155
September, 2023
132
November, 2021
81
February, 2024
36
March, 2023
31
August, 2021
25
January, 2020
25
June, 2020
24
May, 2020
23
May, 2021
20
January, 2021
20
March, 2020
19
February, 2020
15
November, 2022
14
February, 2023
7
April, 2020
7
October, 2019
6
April, 2019
6
August, 2018
6
October, 2022
3
August, 2017
3
January, 2022
3
November, 2019
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
675
bed bed3+
343
tsv
192
bigWig
95
bed bed9
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1145
Homo sapiens
Biosample type
843
primary cell
275
tissue
cell line
27
in vitro differentiated cells
Organ
906
epithelium
611
kidney
427
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
831
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
783
hg19
318
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
1145 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 153 more…
tissue
heart
3
5
37
20
21
2
1
1
heart left ventricle
1
3
11
7
8
2
1
1
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
heart right ventricle
1
1
6
5
5
1
+ See 29 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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