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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
274
gene expression
179
candidate regulatory elements
155
accessible chromatin
123
target gene predictions
108
chromatin state
92
differential activity
51
variant allelic effects
47
binding sites
34
histone modifications
12
eQTL
9
Fine-mapped variants
4
caQTL
Date released
271
September, 2022
248
February, 2021
155
September, 2023
81
February, 2024
38
March, 2023
38
May, 2021
31
August, 2021
31
June, 2020
26
January, 2020
26
May, 2020
22
March, 2020
20
January, 2021
19
February, 2020
15
February, 2023
15
November, 2022
7
April, 2020
7
October, 2019
6
April, 2019
6
August, 2018
6
January, 2022
6
October, 2022
4
November, 2019
3
August, 2017
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
597
bed bed3+
354
tsv
114
bigWig
100
bed bed9
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1088
Homo sapiens
Biosample type
711
primary cell
298
tissue
52
cell line
27
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
904
AMP
155
KPMP
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
710
hg19
197
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
1088 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
1
7
2
1
2
1
4
endothelial cell
9
5
1
2
2
1
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 128 more…
tissue
heart
3
37
5
20
21
2
1
1
heart left ventricle
1
11
3
7
8
2
1
1
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
heart right ventricle
1
6
1
5
5
1
+ See 33 more…
cell line
EndoC_BH1
8
8
1
3
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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