Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
220
candidate regulatory elements
137
target gene predictions
132
chromatin state
101
accessible chromatin
23
gene expression
20
binding sites
14
histone modifications
13
variant allelic effects
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
348
September, 2022
135
February, 2021
27
February, 2023
23
November, 2021
22
November, 2022
18
June, 2020
16
March, 2020
14
January, 2020
13
February, 2020
13
May, 2020
8
August, 2021
8
May, 2021
7
February, 2024
6
April, 2019
6
October, 2022
4
January, 2022
3
April, 2020
3
November, 2019
2
October, 2019
1
August, 2017
1
March, 2024
1
May, 2019
Available data
513
bed bed3+
126
bed bed9
67
bigWig
32
tsv
10
bigBed bed9
Organism
679
Homo sapiens
Biosample type
465
tissue
115
cell line
88
primary cell
11
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
653
AMP
23
ENCODE
3
LungMap
Genome assembly (visualization)
649
hg19
190
GRCh38
BIOSAMPLE
TYPE
679 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
20
21
5
3
1
1
2
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
retina
6
3
3
23
1
1
1
1
1
+ See 17 more…
cell line
A549
21
19
18
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WERI-Rb-1
2
1
1
1
2
1
WI38
5
1
1
+ See 8 more…
primary cell
fibroblast of lung
6
4
4
2
fibroblast of cardiac tissue
3
4
3
2
retinal pigment epithelial cell
2
1
1
3
2
1
type II pneumocyte
2
4
1
iris pigment epithelial cell
2
1
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
olfactory neurosphere cell line
1
1
1
1
cardiac fibroblast
1
See all biosamples
Download