Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
candidate regulatory elements
139
target gene predictions
135
chromatin state
113
accessible chromatin
32
gene expression
19
variant allelic effects
17
binding sites
16
histone modifications
13
eQTL
12
Fine-mapped variants
4
caQTL
1
differential activity
Date released
342
September, 2022
155
February, 2021
27
February, 2023
25
November, 2021
22
November, 2022
21
February, 2024
21
March, 2020
19
January, 2020
18
June, 2020
18
May, 2020
17
February, 2020
10
May, 2021
9
August, 2021
6
April, 2019
5
October, 2022
4
January, 2022
3
August, 2017
3
May, 2019
3
May, 2022
3
November, 2019
3
October, 2019
2
March, 2024
Available data
553
bed bed3+
127
bed bed9
74
bigWig
40
tsv
13
bigBed bed9
Organism
736
Homo sapiens
Biosample type
585
tissue
102
primary cell
36
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
711
AMP
25
ENCODE
Genome assembly (visualization)
701
hg19
202
GRCh38
BIOSAMPLE
TYPE
736 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
differential activity
tissue
heart
37
20
21
5
3
2
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
retina
6
3
3
23
1
1
1
1
1
+ See 35 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
fibroblast of cardiac tissue
3
4
3
2
retinal pigment epithelial cell
2
1
1
3
2
1
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
+ See 19 more…
cell line
WERI-Rb-1
2
1
1
1
2
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
fibroblast of cardiac tissue
2
1
2
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
olfactory neurosphere cell line
1
1
1
1
myotube
1
1
cardiac fibroblast
1
See all biosamples
Download