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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
90
accessible chromatin
73
chromatin state
73
target gene predictions
23
gene expression
19
binding sites
17
histone modifications
13
variant allelic effects
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
174
September, 2022
94
February, 2021
27
February, 2023
22
November, 2022
16
June, 2020
15
March, 2020
14
January, 2020
14
November, 2021
13
February, 2020
13
May, 2020
8
August, 2021
7
February, 2024
6
April, 2019
6
May, 2021
4
January, 2022
3
November, 2019
2
October, 2019
2
October, 2022
1
March, 2024
1
May, 2019
Available data
334
bed bed3+
68
bed bed9
58
bigWig
32
tsv
10
bigBed bed9
Organism
442
Homo sapiens
Biosample type
299
tissue
72
cell line
64
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
428
AMP
14
ENCODE
Genome assembly (visualization)
412
hg19
123
GRCh38
BIOSAMPLE
TYPE
442 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
target gene predictions
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
5
21
20
3
1
1
2
retina
6
23
3
3
1
1
1
1
1
heart left ventricle
11
3
8
7
1
1
2
1
coronary artery
3
3
3
3
1
2
3
2
1
pigmented layer of retina
20
+ See 15 more…
cell line
22Rv1
4
2
2
1
1
WERI-Rb-1
2
1
1
1
2
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 10 more…
primary cell
fibroblast of cardiac tissue
3
2
3
4
retinal pigment epithelial cell
2
3
1
1
2
1
epithelial cell of prostate
4
2
3
iris pigment epithelial cell
2
1
1
1
fibroblast of the conjunctiva
2
1
1
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
cardiac fibroblast
1
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