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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
166
candidate regulatory elements
103
target gene predictions
98
accessible chromatin
97
chromatin state
25
gene expression
19
binding sites
18
histone modifications
15
variant allelic effects
9
Fine-mapped variants
9
eQTL
2
caQTL
Date released
243
September, 2022
123
February, 2021
27
February, 2023
23
November, 2021
22
November, 2022
19
June, 2020
16
March, 2020
14
January, 2020
13
February, 2020
13
May, 2020
9
February, 2024
8
August, 2021
8
May, 2021
6
April, 2019
5
January, 2022
3
March, 2024
3
November, 2019
2
October, 2019
2
October, 2022
1
August, 2017
1
May, 2019
Available data
427
bed bed3+
91
bed bed9
63
bigWig
34
tsv
10
bigBed bed9
Organism
561
Homo sapiens
Biosample type
407
tissue
75
primary cell
72
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
538
AMP
23
ENCODE
Genome assembly (visualization)
528
hg19
156
GRCh38
BIOSAMPLE
TYPE
561 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
20
5
21
3
1
1
2
stomach
40
21
3
19
1
1
1
retina
6
3
23
3
1
1
1
1
1
heart left ventricle
11
7
3
8
1
1
2
1
coronary artery
3
3
3
3
1
2
3
2
1
+ See 21 more…
primary cell
fibroblast of cardiac tissue
3
4
2
3
retinal pigment epithelial cell
2
1
3
1
2
1
epithelial cell of prostate
4
3
2
iris pigment epithelial cell
2
1
1
1
fibroblast of the conjunctiva
2
1
1
+ See 18 more…
cell line
22Rv1
4
2
2
1
1
WERI-Rb-1
2
1
1
1
2
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
cardiac fibroblast
1
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