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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
145
candidate regulatory elements
96
target gene predictions
91
chromatin state
39
accessible chromatin
25
gene expression
12
Fine-mapped variants
12
variant allelic effects
11
binding sites
11
histone modifications
10
eQTL
2
caQTL
Date released
215
September, 2022
97
February, 2021
19
March, 2020
16
November, 2021
14
February, 2020
14
May, 2020
13
January, 2020
13
June, 2020
9
May, 2021
8
August, 2021
8
February, 2024
6
April, 2019
6
January, 2022
4
November, 2019
3
August, 2017
3
February, 2023
2
March, 2024
2
October, 2019
1
May, 2019
1
October, 2022
Available data
324
bed bed3+
83
bed bed9
37
tsv
27
bigWig
11
bigBed bed9
Organism
454
Homo sapiens
Biosample type
373
tissue
43
cell line
37
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
438
AMP
16
ENCODE
Genome assembly (visualization)
421
hg19
147
GRCh38
BIOSAMPLE
TYPE
454 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
Fine-mapped variants
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
tissue
heart
37
20
21
5
3
2
1
1
large intestine
27
14
13
1
1
heart left ventricle
11
7
8
3
1
2
1
1
tibial nerve
6
3
4
3
2
3
2
2
sigmoid colon
10
7
5
1
+ See 22 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
colon epithelial cell
3
3
cardiac fibroblast
3
endocardial cell
1
2
smooth muscle cell of the coronary artery
1
1
1
+ See 6 more…
in vitro differentiated cells
cardiac fibroblast
1
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