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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
140
candidate regulatory elements
94
target gene predictions
88
chromatin state
37
accessible chromatin
23
gene expression
11
binding sites
11
histone modifications
10
variant allelic effects
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
209
September, 2022
94
February, 2021
16
March, 2020
16
November, 2021
13
June, 2020
12
January, 2020
11
February, 2020
11
May, 2020
9
May, 2021
8
August, 2021
8
February, 2024
6
April, 2019
5
January, 2022
3
August, 2017
3
February, 2023
3
November, 2019
2
March, 2024
2
October, 2019
1
May, 2019
1
October, 2022
Available data
313
bed bed3+
80
bed bed9
31
tsv
25
bigWig
10
bigBed bed9
Organism
433
Homo sapiens
Biosample type
348
tissue
43
cell line
37
primary cell
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
417
AMP
16
ENCODE
Genome assembly (visualization)
403
hg19
137
GRCh38
BIOSAMPLE
TYPE
433 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
20
21
5
3
1
1
2
large intestine
27
14
13
1
1
heart left ventricle
11
7
8
3
1
1
2
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
3
1
2
3
2
1
+ See 21 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
colon epithelial cell
3
3
cardiac fibroblast
3
endocardial cell
1
2
smooth muscle cell of the coronary artery
1
1
1
+ See 6 more…
in vitro differentiated cells
olfactory neurosphere cell line
1
1
1
1
cardiac fibroblast
1
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