Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
164
candidate regulatory elements
106
target gene predictions
96
chromatin state
46
accessible chromatin
36
gene expression
25
binding sites
22
eQTL
20
histone modifications
15
Fine-mapped variants
14
variant allelic effects
2
caQTL
2
differential activity
Date released
234
September, 2022
139
February, 2021
23
March, 2020
20
November, 2021
16
February, 2020
16
January, 2020
14
August, 2021
14
June, 2020
14
May, 2020
12
May, 2021
9
January, 2022
8
February, 2024
6
April, 2019
4
October, 2022
3
August, 2017
3
February, 2023
3
November, 2019
2
March, 2024
2
October, 2019
2
September, 2018
1
January, 2018
1
May, 2019
1
November, 2022
Available data
387
bed bed3+
88
bed bed9
53
tsv
32
bigWig
11
bigBed bed9
Organism
548
Homo sapiens
Biosample type
323
tissue
132
primary cell
82
cell line
11
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
528
AMP
20
ENCODE
Genome assembly (visualization)
497
hg19
163
GRCh38
2
hg18
BIOSAMPLE
TYPE
548 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
caQTL
differential activity
tissue
heart
37
20
21
5
3
1
1
2
heart left ventricle
11
7
8
3
1
1
1
2
adipose tissue
7
8
6
2
3
1
4
1
coronary artery
3
3
3
3
1
2
3
2
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
+ See 24 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
1
4
2
fibroblast of cardiac tissue
3
4
3
2
fibroblast of dermis
4
4
3
1
+ See 19 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 19 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
cardiac fibroblast
1
skin fibroblast
1
+ See 1 more…
See all biosamples
Download