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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
74
target gene predictions
61
chromatin state
24
accessible chromatin
9
histone modifications
8
binding sites
4
variant allelic effects
3
eQTL
3
gene expression
Date released
114
September, 2022
21
November, 2021
16
February, 2021
11
June, 2020
6
February, 2024
6
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
March, 2020
1
April, 2020
1
October, 2022
Available data
123
bed bed3+
57
bed bed9
13
bigWig
3
tsv
Organism
186
Homo sapiens
Biosample type
127
tissue
35
primary cell
24
cell line
Organ
843
epithelium
490
kidney
371
connective tissue
317
brain
244
pancreas
220
musculature of body
204
vasculature
179
lung
174
intestine
171
bodily fluid
170
heart
164
blood
157
embryo
153
blood vessel
141
limb
129
skin of body
123
liver
104
large intestine
91
eye
87
extraembryonic component
74
uterus
67
stomach
64
bone element
62
adipose tissue
59
artery
59
mammary gland
51
prostate gland
46
small intestine
44
adrenal gland
44
placenta
41
lymph node
36
penis
33
ureter
32
gonad
28
thymus
27
esophagus
24
spinal cord
18
spleen
17
lymphatic vessel
17
testis
16
nerve
16
vein
15
lymphoid tissue
15
thyroid gland
14
ovary
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
6
tongue
6
urinary bladder
6
vagina
5
trachea
3
nose
1
pericardium
Project
164
AMP
21
ENCODE
1
LungMap
Genome assembly (visualization)
180
hg19
83
GRCh38
annotation_type!
candidate regulatory elements
month_released!
March, 2020
BIOSAMPLE
TYPE
186 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
variant allelic effects
eQTL
gene expression
tissue
small intestine
16
15
1
1
large intestine
14
13
1
1
sigmoid colon
6
5
1
transverse colon
5
4
1
1
Peyer's patch
3
3
1
+ See 14 more…
primary cell
bronchial epithelial cell
2
2
1
1
2
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
club cell
1
2
+ See 5 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
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