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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
35
accessible chromatin
26
target gene predictions
22
gene expression
candidate regulatory elements
17
binding sites
16
histone modifications
11
chromatin state
7
variant allelic effects
3
differential activity
Date released
33
February, 2024
24
November, 2021
24
September, 2022
22
February, 2021
8
June, 2020
5
March, 2020
4
August, 2021
4
March, 2023
4
May, 2021
3
May, 2020
2
January, 2020
2
October, 2022
1
August, 2017
1
July, 2020
Available data
101
bed bed3+
32
bigWig
21
tsv
10
bed bed9
3
csv
Organism
137
Homo sapiens
Biosample type
tissue
84
primary cell
48
cell line
5
in vitro differentiated cells
Organ
799
epithelium
321
kidney
304
connective tissue
167
bodily fluid
161
blood
159
pancreas
150
vasculature
136
embryo
114
skin of body
99
blood vessel
90
liver
87
brain
87
lung
64
uterus
58
musculature of body
57
mammary gland
47
intestine
46
bone element
41
lymph node
40
prostate gland
35
heart
34
penis
32
extraembryonic component
31
eye
30
large intestine
29
artery
17
lymphatic vessel
16
vein
12
bronchus
11
adrenal gland
11
bone marrow
11
stomach
10
pituitary gland
10
placenta
9
gonad
8
esophagus
6
limb
6
testis
5
adipose tissue
5
lymphoid tissue
5
spinal cord
5
trachea
4
mouth
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
113
AMP
24
ENCODE
Genome assembly (visualization)
110
hg19
70
GRCh38
1
hg18
annotation_type!
candidate regulatory elements
biosample_type!
tissue
BIOSAMPLE
TYPE
137 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
binding sites
histone modifications
chromatin state
variant allelic effects
differential activity
primary cell
hepatocyte
8
3
13
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
colon epithelial cell
3
3
enterocyte
3
3
+ See 7 more…
cell line
HepG2
2
3
3
5
2
HT-29
1
2
1
1
1
HuH-7
1
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
+ See 5 more…
in vitro differentiated cells
hepatocyte(AFP)
3
hepatocyte
1
1
See all biosamples
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