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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
65
target gene predictions
59
chromatin state
10
accessible chromatin
histone modifications
6
binding sites
3
eQTL
3
gene expression
3
variant allelic effects
Date released
164
September, 2022
63
February, 2021
10
June, 2020
6
February, 2024
6
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
201
bed bed3+
55
bed bed9
3
tsv
Organism
262
Homo sapiens
Biosample type
228
tissue
31
cell line
3
primary cell
Organ
794
epithelium
643
kidney
418
brain
383
connective tissue
357
musculature of body
298
lung
262
intestine
253
pancreas
252
vasculature
242
limb
239
heart
202
embryo
195
blood vessel
193
bodily fluid
183
blood
181
skin of body
163
large intestine
138
extraembryonic component
137
liver
109
stomach
101
eye
88
adipose tissue
82
bone element
80
small intestine
79
uterus
76
mammary gland
71
prostate gland
70
artery
68
placenta
64
ureter
63
adrenal gland
59
penis
58
lymph node
47
gonad
47
thymus
43
spinal cord
41
esophagus
34
spleen
25
nerve
25
testis
23
lymphoid tissue
22
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
17
lymphatic vessel
13
breast
13
bronchus
12
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
262
AMP
ENCODE
Genome assembly (visualization)
256
hg19
60
GRCh38
award.project!
ENCODE
annotation_type!
histone modifications
BIOSAMPLE
TYPE
262 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 13 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
enterocyte
3
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