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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
224
candidate regulatory elements
141
target gene predictions
131
chromatin state
56
histone modifications
52
accessible chromatin
36
Fine-mapped variants
32
eQTL
22
binding sites
22
gene expression
20
variant allelic effects
Date released
344
September, 2022
181
February, 2021
40
March, 2020
31
June, 2020
29
January, 2020
21
January, 2022
19
May, 2020
18
February, 2020
17
May, 2021
10
August, 2017
7
February, 2024
7
October, 2022
4
March, 2024
4
May, 2019
3
September, 2023
1
November, 2019
Available data
518
bed bed3+
121
bed bed9
70
tsv
21
bigWig
6
bigBed bed9
Organism
735
Homo sapiens
Biosample type
581
tissue
111
cell line
39
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
736
AMP
19
ENCODE
Genome assembly (visualization)
687
hg19
212
GRCh38
BIOSAMPLE
TYPE
736 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
2
1
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
caudate nucleus
5
3
4
1
2
3
2
1
1
+ See 76 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
2
1
1
1
1
SK-N-MC
2
1
1
1
1
2
+ See 17 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 6 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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