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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
224
accessible chromatin
212
candidate regulatory elements
188
target gene predictions
92
differential activity
49
binding sites
41
variant allelic effects
34
histone modifications
7
chromatin state
6
eQTL
2
caQTL
Date released
265
February, 2021
210
September, 2022
155
September, 2023
131
November, 2021
79
February, 2024
40
May, 2021
38
March, 2023
35
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
12
February, 2023
12
January, 2020
9
February, 2020
8
March, 2020
7
April, 2020
7
August, 2017
7
October, 2022
6
August, 2018
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
753
bed bed3+
327
tsv
178
bigWig
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1111
Homo sapiens
Biosample type
779
primary cell
237
tissue
70
cell line
25
in vitro differentiated cells
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
796
AMP
155
KPMP
131
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
756
hg19
193
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
1111 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 147 more…
tissue
small intestine
1
29
17
1
large intestine
1
27
14
1
pigmented layer of retina
20
sigmoid colon
1
10
7
transverse colon
1
8
5
1
+ See 34 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
SW480
1
2
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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