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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
59
chromatin state
59
target gene predictions
10
accessible chromatin
8
histone modifications
6
binding sites
3
eQTL
3
gene expression
3
variant allelic effects
Date released
164
September, 2022
71
February, 2021
10
June, 2020
6
February, 2024
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
203
bed bed3+
55
bed bed9
3
tsv
Organism
264
Homo sapiens
Biosample type
228
tissue
32
cell line
4
primary cell
Organ
788
epithelium
649
kidney
455
brain
394
connective tissue
358
musculature of body
298
lung
264
intestine
257
vasculature
241
heart
241
limb
226
pancreas
214
bodily fluid
206
embryo
203
blood
198
blood vessel
189
skin of body
163
large intestine
148
liver
140
extraembryonic component
108
stomach
105
eye
88
bone element
86
adipose tissue
79
mammary gland
79
small intestine
79
uterus
76
prostate gland
73
artery
70
placenta
64
ureter
63
penis
61
adrenal gland
61
lymph node
47
gonad
47
thymus
42
spinal cord
41
esophagus
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
12
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
264
AMP
ENCODE
Genome assembly (visualization)
258
hg19
60
GRCh38
month_released!
May, 2021
award.project!
ENCODE
BIOSAMPLE
TYPE
264 results
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Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
15
16
1
1
large intestine
27
13
13
1
1
sigmoid colon
10
5
6
1
transverse colon
8
4
4
1
1
Peyer's patch
7
3
3
1
+ See 15 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
1
3
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
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