Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
candidate regulatory elements
10
accessible chromatin
8
histone modifications
8
target gene predictions
6
binding sites
4
chromatin state
3
gene expression
3
variant allelic effects
Date released
September, 2022
71
February, 2021
10
June, 2020
6
May, 2021
4
August, 2017
4
February, 2024
3
March, 2024
2
March, 2020
1
October, 2022
Available data
98
bed bed3+
3
tsv
Organism
101
Homo sapiens
Biosample type
77
tissue
20
cell line
4
primary cell
Organ
613
epithelium
397
kidney
258
connective tissue
194
brain
186
pancreas
143
musculature of body
129
vasculature
115
bodily fluid
110
blood
101
intestine
91
lung
90
blood vessel
90
heart
89
skin of body
81
embryo
75
eye
74
limb
68
liver
66
large intestine
adipose tissue
43
extraembryonic component
40
stomach
39
mammary gland
38
bone element
38
lymph node
38
prostate gland
34
penis
33
artery
22
placenta
22
small intestine
22
ureter
21
gonad
20
adrenal gland
17
esophagus
17
uterus
15
thymus
14
spinal cord
14
spleen
14
vein
12
lymphatic vessel
12
pituitary gland
12
testis
9
bone marrow
8
bronchus
8
lymphoid tissue
8
nerve
8
ovary
8
thyroid gland
6
breast
6
mouth
5
trachea
4
tongue
4
urinary bladder
3
vagina
1
nose
1
pericardium
1
skeleton
Project
101
AMP
Genome assembly (visualization)
119
hg19
GRCh38
organ_slims!
adipose tissue
assembly!
GRCh38
month_released!
September, 2022
BIOSAMPLE
TYPE
101 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
histone modifications
target gene predictions
binding sites
chromatin state
gene expression
variant allelic effects
tissue
large intestine
15
1
1
1
small intestine
14
1
2
sigmoid colon
5
1
2
transverse colon
4
1
1
Peyer's patch
4
1
+ See 14 more…
cell line
HT-29
1
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
SW480
1
1
1
1
Caco-2
1
+ See 2 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
See all biosamples
Download