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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
206
candidate regulatory elements
143
target gene predictions
127
chromatin state
71
accessible chromatin
48
gene expression
28
histone modifications
24
binding sites
17
eQTL
17
variant allelic effects
12
Fine-mapped variants
4
differential activity
3
caQTL
Date released
318
September, 2022
145
February, 2021
40
February, 2024
34
November, 2021
27
March, 2020
20
June, 2020
18
August, 2021
15
January, 2020
14
May, 2020
13
February, 2020
13
May, 2021
7
August, 2017
7
January, 2022
6
April, 2019
4
March, 2023
4
November, 2019
3
February, 2023
3
March, 2024
2
May, 2022
2
October, 2019
2
October, 2022
1
July, 2020
1
May, 2019
1
September, 2018
Available data
502
bed bed3+
115
bed bed9
60
tsv
56
bigWig
11
bigBed bed9
3
csv
1
bam
Organism
700
Homo sapiens
Biosample type
504
tissue
117
primary cell
71
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
666
AMP
34
ENCODE
Genome assembly (visualization)
636
hg19
232
GRCh38
2
hg18
organ_slims!
uterus
BIOSAMPLE
TYPE
700 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
tissue
heart
37
20
21
5
3
1
1
2
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
9
4
1
2
1
7
1
1
heart left ventricle
11
7
8
3
1
1
1
2
+ See 31 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of cardiac tissue
3
4
3
2
hepatic stellate cell
1
1
1
3
1
1
1
colon epithelial cell
3
3
+ See 17 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HuH-7
1
1
1
1
1
1
+ See 9 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
cardiac fibroblast
1
See all biosamples
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