Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
156
candidate regulatory elements
101
target gene predictions
89
chromatin state
51
accessible chromatin
31
gene expression
24
binding sites
15
histone modifications
14
differential activity
12
variant allelic effects
9
Fine-mapped variants
9
eQTL
3
caQTL
Date released
230
September, 2022
112
February, 2021
25
November, 2021
25
September, 2023
21
February, 2024
15
June, 2020
14
March, 2020
11
January, 2020
11
May, 2020
9
May, 2021
6
January, 2022
5
August, 2017
5
February, 2020
4
February, 2023
4
March, 2023
4
March, 2024
3
April, 2020
3
November, 2019
3
October, 2022
2
October, 2019
1
August, 2021
1
May, 2019
Available data
365
bed bed3+
84
bed bed9
55
tsv
37
bigWig
8
bigBed bed9
Organism
514
Homo sapiens
Biosample type
316
tissue
154
primary cell
42
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
461
AMP
25
ENCODE
25
KPMP
3
LungMap
Genome assembly (visualization)
458
hg19
158
GRCh38
BIOSAMPLE
TYPE
514 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
2
3
3
1
2
3
2
+ See 24 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
pulmonary artery endothelial cell
2
1
1
1
1
1
+ See 26 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 6 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download