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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
193
candidate regulatory elements
151
target gene predictions
109
accessible chromatin
107
chromatin state
52
gene expression
37
binding sites
33
histone modifications
eQTL
19
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
284
September, 2022
179
February, 2021
69
November, 2021
30
June, 2020
23
February, 2024
22
May, 2021
17
September, 2023
13
October, 2022
11
August, 2017
11
March, 2020
10
January, 2020
10
May, 2020
7
February, 2020
7
March, 2023
7
November, 2022
3
April, 2020
3
August, 2021
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
555
bed bed3+
96
bed bed9
66
bigWig
64
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
725
Homo sapiens
Biosample type
309
tissue
300
primary cell
65
cell line
50
in vitro differentiated cells
1
stem cell
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
634
AMP
69
ENCODE
15
KPMP
3
LungMap
2
ITG
2
T1D
Genome assembly (visualization)
659
hg19
190
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
725 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
small intestine
29
17
1
15
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
3
1
1
sigmoid colon
10
7
1
5
transverse colon
8
5
1
4
+ See 25 more…
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 50 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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