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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
accessible chromatin
99
candidate regulatory elements
56
target gene predictions
52
gene expression
37
binding sites
33
histone modifications
22
eQTL
19
variant allelic effects
14
differential activity
12
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
September, 2022
180
February, 2021
69
November, 2021
30
June, 2020
24
February, 2024
22
May, 2021
17
September, 2023
13
October, 2022
11
August, 2017
11
August, 2021
11
March, 2020
10
January, 2020
10
May, 2020
9
February, 2020
9
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
369
bed bed3+
66
bigWig
66
tsv
7
txt
2
bigBed bed9
1
bed bed9
1
bigBed narrowPeak
Organism
463
Homo sapiens
Biosample type
229
primary cell
151
tissue
44
cell line
38
in vitro differentiated cells
1
stem cell
Organ
798
epithelium
427
kidney
338
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
370
AMP
69
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
386
hg19
106
GRCh38
2
hg18
month_released!
September, 2022
BIOSAMPLE
TYPE
463 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
9
osteoblast
5
1
1
2
3
2
foreskin fibroblast
1
5
1
4
2
pancreatic stellate cell
2
1
2
3
+ See 48 more…
tissue
subcutaneous adipose tissue
2
2
5
6
1
1
1
3
large intestine
1
15
1
1
small intestine
1
14
2
1
adipose tissue
2
1
2
3
1
4
1
omental fat pad
2
3
2
2
3
+ See 26 more…
cell line
HT-29
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 13 more…
in vitro differentiated cells
adipocyte
4
2
4
1
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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