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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
248
gene expression
208
accessible chromatin
202
candidate regulatory elements
179
target gene predictions
107
chromatin state
89
differential activity
39
variant allelic effects
36
binding sites
25
histone modifications
6
eQTL
2
caQTL
Date released
300
September, 2022
238
February, 2021
155
September, 2023
131
November, 2021
77
February, 2024
36
March, 2023
28
June, 2020
23
August, 2021
23
May, 2021
20
January, 2021
15
November, 2022
13
January, 2020
13
May, 2020
11
February, 2023
9
February, 2020
7
April, 2020
7
August, 2017
7
March, 2020
6
August, 2018
6
October, 2022
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
Available data
694
bed bed3+
318
tsv
176
bigWig
100
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1141
Homo sapiens
Biosample type
823
primary cell
292
tissue
cell line
26
in vitro differentiated cells
Organ
906
epithelium
611
kidney
427
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
828
AMP
155
KPMP
131
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
797
hg19
289
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
1141 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 147 more…
tissue
small intestine
1
29
17
15
1
large intestine
1
27
14
13
1
sigmoid colon
1
10
7
5
pigmented layer of retina
20
transverse colon
1
8
5
4
1
+ See 34 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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