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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
244
gene expression
216
accessible chromatin
212
candidate regulatory elements
188
target gene predictions
111
chromatin state
92
differential activity
49
binding sites
41
variant allelic effects
31
histone modifications
6
eQTL
2
caQTL
Date released
312
September, 2022
265
February, 2021
155
September, 2023
131
November, 2021
79
February, 2024
40
May, 2021
38
March, 2023
35
June, 2020
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
March, 2020
7
April, 2020
7
August, 2017
7
October, 2022
6
August, 2018
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
742
bed bed3+
315
tsv
170
bigWig
104
bed bed9
66
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1192
Homo sapiens
Biosample type
800
primary cell
292
tissue
74
cell line
26
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
447
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
877
AMP
155
KPMP
131
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
849
hg19
294
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1192 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
1
epithelial cell of proximal tubule
15
1
2
1
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
glomerular endothelial cell
13
2
2
1
1
1
+ See 138 more…
tissue
small intestine
1
29
17
15
1
large intestine
1
27
14
13
1
sigmoid colon
1
10
7
5
pigmented layer of retina
20
transverse colon
1
8
5
4
1
+ See 34 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
1
SW480
1
2
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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