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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
candidate regulatory elements
96
target gene predictions
76
chromatin state
32
accessible chromatin
19
eQTL
18
gene expression
9
histone modifications
8
binding sites
8
variant allelic effects
6
Fine-mapped variants
2
differential activity
Date released
209
September, 2022
104
February, 2021
23
November, 2021
13
June, 2020
11
March, 2020
10
February, 2024
9
January, 2022
9
May, 2021
6
August, 2017
6
August, 2021
5
February, 2020
5
March, 2024
4
January, 2020
3
May, 2020
2
September, 2018
1
January, 2018
1
November, 2022
1
October, 2022
Available data
310
bed bed3+
70
bed bed9
27
tsv
18
bigWig
1
bigBed bed9
Organism
423
Homo sapiens
Biosample type
351
tissue
37
cell line
34
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
400
AMP
23
ENCODE
Genome assembly (visualization)
392
hg19
116
GRCh38
2
hg18
BIOSAMPLE
TYPE
423 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
differential activity
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
4
3
1
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
6
5
1
3
1
+ See 29 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 5 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
epithelial cell of esophagus
2
1
1
2
enteric smooth muscle cell
2
2
smooth muscle cell of the esophagus
2
2
+ See 5 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
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