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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
400
candidate regulatory elements
234
target gene predictions
226
gene expression
215
chromatin state
117
accessible chromatin
62
histone modifications
56
differential activity
39
eQTL
38
variant allelic effects
36
Fine-mapped variants
29
binding sites
Date released
590
September, 2022
379
February, 2021
143
September, 2023
48
June, 2020
44
March, 2020
43
January, 2020
38
May, 2020
28
August, 2021
27
February, 2020
26
November, 2021
25
January, 2022
17
May, 2021
10
August, 2017
10
February, 2024
9
October, 2022
8
March, 2024
5
May, 2019
1
April, 2019
1
November, 2019
Available data
879
bed bed3+
323
tsv
205
bed bed9
87
txt
70
bigWig
8
bigBed bed9
Organism
1451
Homo sapiens
Biosample type
917
tissue
377
primary cell
152
cell line
5
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1286
AMP
140
KPMP
26
ENCODE
Genome assembly (visualization)
1133
hg19
350
GRCh38
BIOSAMPLE
TYPE
1452 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
histone modifications
differential activity
eQTL
variant allelic effects
Fine-mapped variants
binding sites
tissue
kidney
29
14
7
16
10
2
1
1
1
brain
29
16
1
18
2
3
2
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
right kidney
20
10
10
1
1
+ See 102 more…
primary cell
epithelial cell of proximal tubule
2
1
16
1
1
1
1
glomerular endothelial cell
2
1
14
1
2
1
glomerular visceral epithelial cell
2
1
5
1
2
kidney tubule cell
3
2
1
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 81 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HEK293
3
1
1
1
1
2
HT-29
2
2
1
1
1
1
+ See 29 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
renal cell carcinoma
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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