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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
178
candidate regulatory elements
113
target gene predictions
97
chromatin state
32
accessible chromatin
14
histone modifications
12
binding sites
4
eQTL
4
gene expression
4
variant allelic effects
Date released
269
September, 2022
111
February, 2021
22
November, 2021
17
June, 2020
10
May, 2021
6
February, 2024
5
August, 2017
4
January, 2022
4
March, 2024
3
March, 2020
3
October, 2022
2
January, 2020
2
May, 2020
Available data
357
bed bed3+
92
bed bed9
15
bigWig
4
tsv
2
bigBed bed9
Organism
458
Homo sapiens
Biosample type
331
tissue
83
primary cell
39
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
436
AMP
22
ENCODE
Genome assembly (visualization)
449
hg19
121
GRCh38
BIOSAMPLE
TYPE
458 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
17
15
1
1
placenta
26
15
14
1
2
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
+ See 22 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
colon epithelial cell
3
3
enterocyte
3
3
+ See 13 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 5 more…
in vitro differentiated cells
trophoblast cell
2
2
1
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