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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
150
candidate regulatory elements
95
target gene predictions
87
accessible chromatin
78
chromatin state
17
eQTL
17
gene expression
14
binding sites
13
histone modifications
8
variant allelic effects
6
Fine-mapped variants
2
differential activity
Date released
215
September, 2022
111
February, 2021
24
February, 2023
23
November, 2021
23
November, 2022
17
June, 2020
10
March, 2020
9
February, 2024
9
May, 2021
7
February, 2020
6
August, 2017
6
August, 2021
6
January, 2020
6
January, 2022
5
May, 2020
3
March, 2024
3
October, 2022
2
September, 2018
1
January, 2018
Available data
375
bed bed3+
72
bed bed9
52
bigWig
27
tsv
1
bigBed bed9
Organism
487
Homo sapiens
Biosample type
386
tissue
47
cell line
47
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
464
AMP
23
ENCODE
Genome assembly (visualization)
459
hg19
118
GRCh38
2
hg18
BIOSAMPLE
TYPE
487 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
eQTL
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
differential activity
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
retina
6
3
23
3
1
1
1
1
1
adipose tissue
7
8
2
6
4
3
1
1
sigmoid colon
10
7
1
5
+ See 27 more…
cell line
HT-29
2
2
1
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 8 more…
primary cell
retinal pigment epithelial cell
2
1
3
1
2
1
colon epithelial cell
3
3
enterocyte
3
3
iris pigment epithelial cell
2
1
1
1
enteric smooth muscle cell
2
2
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
white adipose cell
1
See all biosamples
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