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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
154
candidate regulatory elements
104
accessible chromatin
103
target gene predictions
85
chromatin state
28
gene expression
26
histone modifications
25
binding sites
12
eQTL
9
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
237
September, 2022
114
February, 2021
36
February, 2024
28
November, 2021
24
February, 2023
22
November, 2022
21
June, 2020
12
March, 2020
10
August, 2021
9
May, 2021
7
August, 2017
5
January, 2020
5
May, 2020
4
February, 2020
4
January, 2022
4
March, 2023
4
October, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
427
bed bed3+
78
bed bed9
70
bigWig
33
tsv
3
csv
1
bam
1
bigBed bed9
Organism
554
Homo sapiens
Biosample type
360
tissue
109
primary cell
72
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
526
AMP
28
ENCODE
Genome assembly (visualization)
514
hg19
155
GRCh38
2
hg18
BIOSAMPLE
TYPE
554 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
small intestine
29
1
17
15
1
large intestine
27
1
14
13
1
liver
13
4
10
9
1
2
1
7
1
1
retina
6
23
3
3
1
1
1
1
1
sigmoid colon
10
1
7
5
+ See 21 more…
primary cell
hepatocyte
1
8
3
1
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
retinal pigment epithelial cell
2
3
1
1
1
2
hepatic stellate cell
1
3
1
1
1
1
1
colon epithelial cell
3
3
+ See 13 more…
cell line
HepG2
2
2
3
2
5
3
HT-29
2
1
2
1
1
1
WERI-Rb-1
2
1
1
1
1
2
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
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