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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
62
target gene predictions
61
chromatin state
11
accessible chromatin
9
histone modifications
6
binding sites
3
eQTL
3
gene expression
3
variant allelic effects
Date released
170
September, 2022
72
February, 2021
11
June, 2020
7
February, 2024
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
210
bed bed3+
57
bed bed9
3
tsv
Organism
273
Homo sapiens
Biosample type
231
tissue
38
cell line
4
primary cell
Organ
604
epithelium
509
kidney
455
brain
368
connective tissue
358
musculature of body
295
lung
264
intestine
241
heart
241
limb
219
vasculature
214
bodily fluid
206
embryo
204
pancreas
203
blood
189
skin of body
176
blood vessel
163
large intestine
148
liver
140
extraembryonic component
108
stomach
105
eye
86
adipose tissue
86
bone element
79
mammary gland
79
small intestine
79
uterus
76
prostate gland
70
placenta
68
artery
64
ureter
63
penis
61
adrenal gland
61
lymph node
47
gonad
47
thymus
42
spinal cord
41
esophagus
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
mouth
18
skeleton
13
bronchus
12
breast
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
273
AMP
19
ENCODE
Genome assembly (visualization)
267
hg19
63
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
273 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
16
15
1
1
large intestine
27
13
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
4
4
1
1
Peyer's patch
7
3
3
1
+ See 16 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
GM18507
1
2
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
+ See 4 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
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