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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
276
candidate regulatory elements
165
target gene predictions
141
chromatin state
55
accessible chromatin
27
gene expression
23
eQTL
16
histone modifications
15
binding sites
13
variant allelic effects
12
Fine-mapped variants
3
differential activity
2
caQTL
Date released
389
September, 2022
185
February, 2021
30
November, 2021
23
February, 2024
19
March, 2020
17
June, 2020
15
May, 2021
11
February, 2020
9
January, 2020
8
August, 2017
8
May, 2020
7
August, 2021
7
January, 2022
5
March, 2024
4
October, 2022
3
May, 2022
2
May, 2019
2
September, 2018
1
January, 2018
1
November, 2022
1
October, 2019
Available data
554
bed bed3+
133
bed bed9
39
tsv
32
bigWig
4
bigBed bed9
Organism
748
Homo sapiens
Biosample type
617
tissue
74
primary cell
54
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
718
AMP
30
ENCODE
Genome assembly (visualization)
714
hg19
197
GRCh38
2
hg18
BIOSAMPLE
TYPE
748 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
differential activity
caQTL
tissue
muscle of arm
33
16
16
1
1
small intestine
29
17
15
1
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
muscle of back
28
13
13
+ See 44 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
colon epithelial cell
3
3
+ See 12 more…
cell line
HT-29
2
2
1
1
1
1
LHCN-M2
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
A673
2
2
1
+ See 8 more…
in vitro differentiated cells
myotube
1
1
white adipose cell
1
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