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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
159
candidate regulatory elements
101
target gene predictions
82
chromatin state
33
accessible chromatin
17
eQTL
17
gene expression
16
binding sites
16
histone modifications
7
variant allelic effects
6
Fine-mapped variants
2
differential activity
Date released
227
September, 2022
123
February, 2021
19
November, 2021
16
June, 2020
11
May, 2021
10
March, 2020
9
February, 2024
7
January, 2022
6
August, 2017
6
August, 2021
5
February, 2020
4
January, 2020
4
March, 2024
3
May, 2020
2
September, 2018
1
January, 2018
1
November, 2022
1
October, 2022
Available data
340
bed bed3+
76
bed bed9
26
tsv
16
bigWig
1
bigBed bed9
Organism
456
Homo sapiens
Biosample type
331
tissue
90
cell line
34
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
437
AMP
19
ENCODE
Genome assembly (visualization)
428
hg19
116
GRCh38
2
hg18
BIOSAMPLE
TYPE
456 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
differential activity
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
4
3
1
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
6
5
1
3
1
+ See 25 more…
cell line
22Rv1
4
2
2
1
1
HT-29
2
2
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 15 more…
primary cell
epithelial cell of prostate
4
3
2
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
+ See 5 more…
in vitro differentiated cells
white adipose cell
1
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