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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
117
target gene predictions
94
chromatin state
31
accessible chromatin
10
histone modifications
7
binding sites
5
gene expression
5
variant allelic effects
4
eQTL
Date released
178
September, 2022
29
November, 2021
16
February, 2021
14
June, 2020
9
May, 2021
7
February, 2024
5
August, 2017
5
March, 2024
4
January, 2022
4
March, 2020
1
May, 2020
1
October, 2022
Available data
175
bed bed3+
89
bed bed9
17
bigWig
5
tsv
Organism
273
Homo sapiens
Biosample type
214
tissue
35
primary cell
24
cell line
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
244
AMP
29
ENCODE
Genome assembly (visualization)
264
hg19
124
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
273 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
gene expression
variant allelic effects
eQTL
tissue
stomach
21
19
3
1
1
1
small intestine
17
15
1
1
large intestine
14
13
1
1
thymus
14
11
1
1
1
sigmoid colon
7
5
1
+ See 21 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
parietal cell
1
1
1
peptic cell
1
1
1
+ See 8 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
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