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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
193
candidate regulatory elements
151
target gene predictions
107
chromatin state
52
gene expression
44
accessible chromatin
39
binding sites
35
histone modifications
24
eQTL
19
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
284
September, 2022
183
February, 2021
31
June, 2020
26
November, 2021
22
February, 2024
22
May, 2021
17
September, 2023
13
October, 2022
11
August, 2017
11
August, 2021
11
March, 2020
10
May, 2020
9
February, 2020
9
January, 2022
7
March, 2023
7
November, 2022
3
March, 2024
2
May, 2022
2
May, 2024
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2020
1
January, 2021
1
November, 2020
1
October, 2019
Available data
563
bed bed3+
96
bed bed9
68
tsv
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
688
Homo sapiens
Biosample type
320
tissue
254
primary cell
65
cell line
48
in vitro differentiated cells
1
stem cell
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
640
AMP
26
ENCODE
15
KPMP
4
ITG
2
community
1
T1D
Genome assembly (visualization)
609
hg19
144
GRCh38
2
hg18
files.file_type!
bigWig
BIOSAMPLE
TYPE
688 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
adipose tissue
7
8
6
3
1
1
4
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
5
6
1
1
3
+ See 25 more…
primary cell
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast
4
2
1
2
6
osteoblast
2
2
1
2
2
3
2
fibroblast of dermis
4
4
3
1
+ See 51 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
6
1
3
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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