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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
287
candidate regulatory elements
206
gene expression
156
target gene predictions
142
chromatin state
74
accessible chromatin
56
differential activity
19
variant allelic effects
16
binding sites
16
histone modifications
8
eQTL
Date released
407
September, 2022
273
February, 2021
140
September, 2023
28
August, 2021
27
June, 2020
22
November, 2021
19
May, 2020
14
January, 2020
9
February, 2020
7
February, 2024
7
May, 2021
6
March, 2020
6
March, 2024
5
January, 2022
4
August, 2017
3
October, 2022
1
April, 2019
1
May, 2019
1
November, 2019
Available data
568
bed bed3+
255
tsv
138
bed bed9
87
txt
48
bigWig
2
bigBed bed9
Organism
980
Homo sapiens
Biosample type
567
tissue
337
primary cell
75
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
818
AMP
140
KPMP
22
ENCODE
Genome assembly (visualization)
707
hg19
192
GRCh38
BIOSAMPLE
TYPE
980 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
tissue
kidney
29
7
14
16
10
1
1
2
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
+ See 36 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 71 more…
cell line
HEK293
3
1
1
1
2
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
ACHN
2
1
1
1
+ See 15 more…
in vitro differentiated cells
renal cell carcinoma
1
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