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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
181
candidate regulatory elements
167
target gene predictions
96
chromatin state
33
accessible chromatin
15
histone modifications
13
binding sites
5
eQTL
5
gene expression
3
variant allelic effects
Date released
275
September, 2022
114
February, 2021
57
February, 2024
24
November, 2021
18
June, 2020
11
May, 2021
5
January, 2022
5
March, 2024
4
August, 2017
3
October, 2022
2
March, 2020
Available data
416
bed bed3+
92
bed bed9
15
bigWig
5
tsv
Organism
518
Homo sapiens
Biosample type
343
tissue
102
cell line
68
primary cell
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
494
AMP
24
ENCODE
Genome assembly (visualization)
508
hg19
174
GRCh38
BIOSAMPLE
TYPE
518 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
17
15
1
1
placenta
26
15
14
1
2
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
+ See 25 more…
cell line
HeLa-S3
5
55
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 6 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
+ See 14 more…
in vitro differentiated cells
trophoblast cell
2
2
1
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