Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
281
candidate regulatory elements
207
gene expression
206
target gene predictions
140
chromatin state
74
accessible chromatin
56
differential activity
19
variant allelic effects
17
binding sites
16
histone modifications
8
eQTL
Date released
401
September, 2022
269
February, 2021
140
September, 2023
58
February, 2024
28
August, 2021
27
June, 2020
24
November, 2021
19
May, 2020
14
January, 2020
9
February, 2020
8
May, 2021
7
March, 2024
5
January, 2022
5
March, 2020
4
August, 2017
4
October, 2022
1
April, 2019
1
May, 2019
Available data
613
bed bed3+
256
tsv
136
bed bed9
87
txt
48
bigWig
2
bigBed bed9
Organism
1024
Homo sapiens
Biosample type
546
tissue
337
primary cell
140
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
860
AMP
140
KPMP
24
ENCODE
Genome assembly (visualization)
750
hg19
242
GRCh38
BIOSAMPLE
TYPE
1024 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
tissue
kidney
29
7
14
16
10
1
1
2
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
+ See 39 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 72 more…
cell line
HeLa-S3
5
55
3
1
HEK293
3
1
1
1
2
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 17 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
Download