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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
200
gene expression
159
candidate regulatory elements
77
chromatin state
75
target gene predictions
56
differential activity
50
accessible chromatin
16
variant allelic effects
7
binding sites
6
histone modifications
3
eQTL
Date released
225
September, 2022
188
February, 2021
140
September, 2023
28
August, 2021
19
May, 2020
15
June, 2020
14
January, 2020
9
February, 2020
3
March, 2020
3
November, 2021
2
October, 2022
1
April, 2019
1
January, 2022
1
May, 2019
Available data
297
bed bed3+
249
tsv
87
txt
77
bed bed9
36
bigWig
2
bigBed bed9
Organism
649
Homo sapiens
Biosample type
309
primary cell
298
tissue
41
cell line
1
in vitro differentiated cells
Organ
871
epithelium
649
kidney
464
brain
440
connective tissue
358
musculature of body
309
lung
280
intestine
252
pancreas
250
heart
248
vasculature
243
limb
201
skin of body
189
bodily fluid
188
blood vessel
178
blood
169
large intestine
164
embryo
146
extraembryonic component
127
liver
115
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
76
prostate gland
75
artery
73
placenta
71
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
spinal cord
41
esophagus
33
spleen
30
uterus
25
nerve
25
testis
22
lymphoid tissue
22
ovary
22
vein
21
lymphatic vessel
21
thyroid gland
18
mouth
18
skeleton
15
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
506
AMP
140
KPMP
3
ENCODE
Genome assembly (visualization)
386
hg19
105
GRCh38
BIOSAMPLE
TYPE
649 results
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Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
differential activity
accessible chromatin
variant allelic effects
binding sites
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
glomerular visceral epithelial cell
5
2
1
1
2
kidney tubule cell
1
3
2
2
2
kidney glomerular epithelial cell
1
2
1
1
2
1
+ See 63 more…
tissue
kidney
7
29
16
14
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 12 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 7 more…
in vitro differentiated cells
renal cell carcinoma
1
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