Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
143
candidate regulatory elements
68
chromatin state
66
target gene predictions
accessible chromatin
13
gene expression
10
variant allelic effects
6
binding sites
6
histone modifications
4
eQTL
Date released
198
September, 2022
95
February, 2021
10
May, 2020
3
March, 2020
2
February, 2020
2
March, 2024
1
April, 2019
1
August, 2021
1
February, 2024
1
January, 2022
1
May, 2019
1
October, 2022
Available data
230
bed bed3+
68
bed bed9
13
tsv
2
bigBed bed9
1
bigWig
Organism
316
Homo sapiens
Biosample type
primary cell
280
tissue
36
cell line
Organ
398
brain
316
kidney
315
musculature of body
271
lung
256
intestine
223
limb
204
heart
198
bodily fluid
187
blood
185
embryo
161
large intestine
151
connective tissue
123
pancreas
105
stomach
103
extraembryonic component
98
skin of body
86
liver
86
vasculature
81
adipose tissue
81
blood vessel
79
small intestine
77
epithelium
77
uterus
63
prostate gland
62
bone element
62
placenta
61
adrenal gland
60
ureter
54
lymph node
47
thymus
43
gonad
39
artery
39
mammary gland
37
spinal cord
34
eye
33
esophagus
32
spleen
23
testis
22
lymphoid tissue
22
nerve
21
penis
20
ovary
19
thyroid gland
14
mouth
13
pituitary gland
12
breast
10
skeleton
10
vagina
9
tongue
9
urinary bladder
3
lymphatic vessel
3
nose
3
vein
Project
316
AMP
Genome assembly (visualization)
299
hg19
69
GRCh38
annotation_type!
accessible chromatin
biosample_type!
primary cell
BIOSAMPLE
TYPE
316 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
gene expression
variant allelic effects
binding sites
histone modifications
eQTL
tissue
kidney
29
16
14
7
1
1
2
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
renal pelvis
19
9
9
1
left kidney
18
9
9
+ See 13 more…
cell line
HEK293
3
1
1
2
1
ACHN
2
1
1
Caki2
2
1
1
G401
2
1
1
RCC 7860
2
1
1
+ See 7 more…
See all biosamples
Download