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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
243
candidate regulatory elements
237
accessible chromatin
188
target gene predictions
121
chromatin state
47
binding sites
44
variant allelic effects
33
histone modifications
4
eQTL
1
caQTL
1
gene expression
Date released
349
September, 2022
196
February, 2021
128
November, 2021
61
February, 2024
32
June, 2020
21
May, 2020
20
August, 2021
20
January, 2020
20
January, 2021
17
May, 2021
15
November, 2022
10
February, 2023
7
April, 2020
7
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
April, 2019
1
February, 2020
1
May, 2019
1
November, 2019
Available data
797
bed bed3+
186
bigWig
118
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
919
Homo sapiens
Biosample type
493
primary cell
339
tissue
68
cell line
19
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
764
AMP
128
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
919
hg19
320
GRCh38
BIOSAMPLE
TYPE
919 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
gene expression
primary cell
endothelial cell
15
7
2
2
1
1
1
1
hepatocyte
1
8
3
1
1
2
4
endothelial cell of umbilical vein
6
2
4
5
2
foreskin keratinocyte
11
4
4
keratinocyte
3
2
5
3
1
1
2
+ See 96 more…
tissue
kidney
29
10
14
16
1
1
2
1
right kidney
20
1
10
10
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 24 more…
cell line
EndoC_BH1
8
1
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 1 more…
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