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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
186
candidate regulatory elements
90
chromatin state
90
target gene predictions
54
accessible chromatin
15
binding sites
13
histone modifications
12
variant allelic effects
3
eQTL
Date released
264
September, 2022
124
February, 2021
19
June, 2020
16
August, 2021
14
January, 2020
14
May, 2020
3
November, 2021
2
February, 2024
2
May, 2021
2
October, 2022
1
April, 2019
1
February, 2020
1
May, 2019
Available data
372
bed bed3+
90
bed bed9
36
bigWig
2
bigBed bed9
Organism
463
Homo sapiens
Biosample type
300
tissue
91
cell line
71
primary cell
1
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
460
AMP
3
ENCODE
Genome assembly (visualization)
463
hg19
119
GRCh38
BIOSAMPLE
TYPE
463 results
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candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
tissue
kidney
29
16
14
10
1
2
1
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 13 more…
cell line
22Rv1
4
2
2
1
1
HEK293
3
1
1
1
2
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 14 more…
primary cell
epithelial cell of prostate
4
2
3
kidney tubule cell
3
2
2
2
epithelial cell of proximal tubule
2
1
1
1
1
1
renal cortical epithelial cell
2
1
1
2
1
glomerular endothelial cell
2
1
1
1
1
+ See 15 more…
in vitro differentiated cells
renal cell carcinoma
1
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