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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
183
candidate regulatory elements
112
target gene predictions
101
accessible chromatin
94
chromatin state
89
differential activity
27
variant allelic effects
19
eQTL
12
binding sites
12
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
269
September, 2022
219
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
25
May, 2020
20
January, 2021
19
June, 2020
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
2
April, 2019
2
March, 2024
2
November, 2019
2
October, 2022
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
447
bed bed3+
327
tsv
90
bed bed9
87
txt
79
bigWig
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
908
Homo sapiens
Biosample type
415
tissue
414
primary cell
75
cell line
4
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
746
AMP
140
KPMP
ENCODE
20
T1D
2
community
Genome assembly (visualization)
552
hg19
145
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
908 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
kidney
7
29
14
10
16
1
1
1
2
islet of Langerhans
11
1
6
3
1
13
2
1
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 26 more…
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic beta cell
3
3
6
3
1
pancreatic ductal cell
3
2
4
3
1
1
2
pancreatic alpha cell
3
3
5
3
1
+ See 77 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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